Assessing the association of single nucleotide polymorphisms at the thyroglobulin gene with carcass traits in beef cattle

The objective of this study was to assess the association of SNP in the thyroglobulin gene, including a previously reported marker in current industry use, with marbling score in beef cattle. Three populations, designated GPE6, GPE7, and GPE8, were studied. The GPE6 population sampled breeds that could be used as alternative germplasm sources in beef cattle production, including Wagyu, Swedish Red and White, Friesian, and Norwegian Red. The GPE7 population sampled 7 popular beef cattle breeds used in temperate climates of the United States: Angus, Charolais, Gelbvieh, Hereford, Limousin, Red Angus, and Simmental. The GPE8 population sampled Bos indicus-influenced breeds used in subtropical regions of the country and subtropical and tropical regions of the world, including Beefmaster, Bonsmara, Brangus, and Romosinuano. Evaluation of 6 SNP in the thyroglobulin gene, including 5 newly described variations, showed no association (P > 0.10) with marbling score in these populations, except a tendency (P < 0.10) for an association with the previously described marker in GPE6. Closer examination of the GPE6 data revealed that the source of the tendency was an association (P < 0.02) with marbling in animals of Wagyu inheritance. Animals having Wagyu background and inheriting the TT genotype had a greater marbling score (599 +/- 20) than those inheriting the CC (540 +/- 10) or the CT (541 +/- 11) genotype. No association was detected with any other carcass trait for this marker in the 3 populations. Furthermore, none of the 5 newly described markers in the gene displayed an association with marbling score. The data indicate that markers at the thyroglobulin gene may be a useful predictor of marbling performance for producers raising Wagyu-based cattle. Although associations with marbling score in the remaining populations were not large or significant, the TT genotype had the numerically greatest marbling score in each population.     

The growth and nitrogen economy of rice under sprinkler and flood irrigation in South East Australia

Summary ¹⁵N balances were compared in rice (Oryza sativa L., cv. Calrose) grown under continuous flood (CF) or sprinkler irrigation. Two sprinkler treatments with irrigation frequencies of once (S1W) and thrice (S3W) per week were studied. Five atom %¹⁵N-labelled urea (60 kg N ha^–1) was applied to microplots either 36 or 84 days after emergence (DAE). An equivalent amount of unlabelled urea was applied at the other application time, so that each microplot received a total of 120 kg N ha^–1 in an equal split. There was no significant effect of irrigation treatment on recovery of urea N by straw. Straw recovery from urea applied 36 DAE was almost half that from an application 84 DAE, and time of urea application produced a similar effect on recovery in grain. Grain recovery in S1W was less than half that in CF and S3W for both application times. Total plant recovery of urea N applied 36 DAE was similar for all irrigation treatments (average 29%), but for urea applied 84 DAE total plant recovery in CF (67%) was significantly higher than in S1W (49%). Total N uptake in the plant tops was considerably lower in both the sprinkler-irrigated treatments when compared with CF, and this was mostly due to reduced soil N uptake in S3W (one-half) and S1W (one-third). The proportion of N derived from fertilizer in the plant tops increased from 40% in CF to 60% in S1W. Immobilization of applied N in the soil of the sprinkler-irrigated treatments was greater than in CF by factors of 1.5 (S3W) and 2 (S1W). Immobilization of urea N applied 36 DAE was almost 50% greater than immobilization of urea N applied 84 DAE. There was a trend for lower losses of fertilizer N with sprinkler irrigation (mean loss 18% of the applied N) compared with CF (27%). Within all irrigation treatments, the loss from urea applied 36 DAE was more than double the loss from urea applied 84 DAE. An additional study in CF compared the ¹⁵N balance for split application versus a single dose applied 36 DAE (before permanent flood). Split application resulted in significantly increased plant recovery of applied ¹⁵N, and this was largely associated with increased recovery in the grain. Slightly more fertilizer N was immobilized in the soil with a single application. The effect of application method on N loss was not significant.     

The growth and nitrogen economy of rice under sprinkler and flood irrigation in South East Australia

Summary Dry-seeded rice (Oryza sativa L., cv. Calrose) was subjected to 4 irrigation treatments — continuous flood (CF) and sprinkler irrigation at frequencies of one (S1 W), two (S2W) and three (S3W) applications per week — commencing 37 d after 50% emergence (DAE). The amount of water applied was calculated to replace water lost by pan evaporation. Urea (120 kg N ha^–1) was applied in a 1:1 split 36 and 84 DAE, and there were also unfertilized controls for each irrigation treatment. Amounts of nitrate (NO ₃ ^– ) in the soil were very low throughout the growing season in all treatments, despite regular periods of draining which lasted for up to 7 d in SlW. In all irrigation treatments, the majority of the fertilizer nitrogen (N) was located in the top 20 mm of soil. After each application of fertilizer, levels of mineral N in CF declined rapidly, while levels in S3W and S1W remained high for 1–2 weeks longer. The poor growth of sprinkler-irrigated rice was not due to lower amounts of mineral N in the soil. The greater persistence of fertilizer N in the sprinkler-irrigated treatments was probably due to reduced root activity near the soil surface because of frequent periods of soil drying in between irrigations. Net mineralization of soil N in the unfertilized sprinkler-irrigated treatments was reduced by about half compared with CF.On average, the quantity of water applied (1.2–1.4 × EP) to the sprinkler-irrigated treatments appeared to be sufficient to meet the evapotranspiration demands of the crop, except possibly around flowering time. However, the plants may have suffered from moisture stress in between irrigations. Soil matric potential data at 100 mm suggested little water stress in the sprinkler-irrigated treatments during the vegetative stage, consistent with the similar tiller and panicle densities in all irrigation treatments. However, the crop was stunted and yellow and leaf rolling was observed in the sprinkler-irrigated treatments during this period. Soil matric potential data at 100 mm indicated considerable water stress in S1W beyond the commencement of anthesis, and in S2W during grain filling, consistent with the reduced floret fertility and grain weight in those treatments.     

Behaviour of domestic ducks exposed to mobile predator stimuli. 1. Flock responses

1. Small flocks of ducks (Anasplatyrhynchos domesticus) were exposed to two stimuli, a small mobile vehicle and a walking human, to investigate their flight responses. 2. Experiment 1. Flocks were herded around an annular arena by each stimulus at 0.5 ms(-1) and the flight distance between the stimulus and the centre of the flock, and individual positions within the flock were recorded every 10 s. Flocks maintained a significantly longer distance from the human (6.0 m) than the vehicle (5.1 m) and usually did not maintain visual contact with either stimulus. Significant consistency in individual positions within the flock was found within and between trials. 3. Experiment 2. Flocks were exposed to each stimulus which approached them as they were feeding in a circular arena. The latencies for cessation and resumption of feeding were recorded and the paths followed by the flocks described. Ducks showed a significantly shorter latency to cease feeding in response to the human (4.9 s) compared with the vehicle (6.9 s). 4. Domestic ducks apparently perceive an approaching human as a greater threat than a small vehicle. The findings are discussed in relation to the development of herding robots.     

Ultraviolet light and mating behaviour in domestic broiler breeders

1. The perception of UVA light (320 < lambda < 400 nm) by domestic fowl may be an adaptation to naturally lit habitats and may still be functional in farmed varieties, although not utilised owing to the absence of these wavelengths in commercial house lighting. One function may be the mediation of sexually related signalling or communication. 2. In experiment 1, two groups of 41 adult broiler breeders (four cockerels, 37 hens) were kept under conventional fluorescent light, with or without fluorescent UVA supplementation amounting to 16.9% of the total spectral power output of the luminaires. Each light environment was approximately iso-illuminant as perceived by the birds. The two groups were exposed to the light environments alternately for five 2-day periods in a cross-over design. Mating behaviour, production measures and time budgets were recorded on the second day of each period. 3. A UVA-enriched environment increased the number of attempted matings (1.27 vs 0.99 matings/cockerel.h) and locomotion (5.3 vs 3.7 min/bird.hour). 4. In a second experiment, 10 hens were allowed to choose between four cockerels lit under different power levels of UVA (1.6%, 14.6%, 43.5%, 57.5% of the total spectral power output of the luminaires) in a four-armed maze. Again, each light environment was approximately iso-illuminant as perceived by the birds. Each hen was allowed to make one choice per day over four days, with the position of the cockerels and the UVA levels interchanged each day. This schedule was repeated with the same hens for two other groups of four cockerels. 5. At a distance of no less than 60 cm from the cockerel, the hens spent most time inspecting whichever cockerel was lit by 1.6% or 14.6% UVA (1.33 vs 1.37 vs 1.22 vs 1.16 log seconds/hen.choice, respectively for increasing UVA level). Similarly, when allowed to approach closer to the cockerels, the hens spent most time in the arm which contained a cockerel lit by 14.6% UVA light, (1.62 vs 1.88 vs 1.69 vs 1.51 log s/hen.choice, respectively for increasing UVA level). 6. UVA is clearly implicated in the transmission of sexual signals or communication which may have implications for the welfare and production of broiler breeders.     

Bacterial biodegradation of ethoxylated surfactants

Agricultural, industrial and domestic use of surfactants leads to the entry of these compounds into terrestrial and aquatic ecosystems. Synthetic surfactants vary significantly in structure, but most consist of alkyl or alkylphenol groups attached to nonionic or anionic hydrophilic moieties. Continued use of these compounds is usually justified on the basis that they do not cause pollution problems because they undergo biodegradation by micro-organisms present in soils and surface waters. In accomplishing biodegradation, micro-organisms, predominantly bacteria, are exploiting these potentially useful resources of reduced carbon to derive energy and support growth in situations which are otherwise frequently oligotrophic. This paper reviews aspects of surfactant biodegradation, especially in relation to alcohol and alkylphenol ethoxylates used extensively as adjuvants for agrochemicals. In principle, bacteria can employ two strategies to gain access to the aliphatic chains in alcohol ethoxylate surfactants: separation of the hydrophobic chain from the hydrophile (central fission), or direct attack on the -terminal of the alkyl chain of the intact surfactant. Direct exo-cleavage of ethylene glycol units from the polyethylene glycol (PEG) chain also provides a third route to assimilable carbon. In pure cultures of known degraders or in mined environmental samples, all three strategies are exploited, some even within the same organism. Central fission occurs predominantly at the alkyl-ether bond, but may also occur within the PEG chain itself, thus producing various glycol intermediates which accumulate in pure cultures but appear only transiently in mixed environmental samples. Against this background, the relative resistance of some alkylphenol ethoxylates to biodegradation can be assessed in mechanistic terms. The steric bulk of the aryl nucleus effectively eliminates the central fission pathway. Moreover, some alkyl phenol ethoxylates contain branched alkyl chains which restrict ω-β-oxidation. As a result, ethoxylate shortening appears to be the major course of biodegradation observed so far. Not surprisingly, these surfactants are observed to undergo extensive primary biodegradation (removal of surfactant properties) but relatively restricted ultimate degradation to carbon dioxide and normal cell components.     

Use of a water hardness test kit to measure serum calcium concentration in cattle

OBJECTIVE: To determine whether a commercially available water hardness test kit could be used to measure total serum calcium concentration and diagnose hypocalcemia in dairy cows. DESIGN: Prospective study. ANIMALS: 30 dairy cows from 19 commercial herds. PROCEDURE: Serum calcium concentration was determined using a water hardness test kit and a standard, laboratory-based method. Simple linear regression was used to determine whether there was a linear relationship between results of the 2 methods, and Spearman's rank correlation was used to calculate correlation between measurements. Sensitivity, specificity, and predictive values of using test kit-derived values for diagnosis of hypocalcemia (laboratory value < 8 mg/dl) were calculated. RESULTS: There was a high correlation and significant linear relationship between results of the 2 methods. Sensitivity, specificity, predictive value of a positive test result, and predictive value of a negative test result were 100, 73, 86, and 100%, respectively. Accuracy was improved by using a test kit-derived calcium concentration of 7 mg/dl as the cut-off for determining hypocalcemia. CLINICAL IMPLICATIONS: Results indicate that a commercially available water hardness test kit can be used as a rapid, inexpensive method of estimating serum calcium concentrations and diagnosing hypocalcemia in dairy cattle. However, the test is not practical for cow-side use, because blood samples must be centrifuged to obtain serum for use in the test kit.     

Effect of feed intake on antimicrobially induced increases in porcine serum insulin-like growth factor I

This study was conducted to determine whether an antimicrobially induced (ASP-250) increase in serum IGF-I was the result of differences in feed intake. Serum IGF-I concentrations were measured in crossbred pigs that were fed a control diet or a diet supplemented with ASP-250 either for ad libitum consumption or limited to 85% of the control pigs' consumption. The pigs that consumed either diet ad libitum, control or ASP-250, consumed similar quantities of feed. The ASP-250 ad libitum-intake pigs had serum IGF-I concentrations that were greater (P<.01) than those of their ad libitum-intake control littermates. Similarly, the ASP-250 limit-fed pigs had serum IGF-I concentrations that were greater (P<.01) than those of the controls. Although the serum IGF-I concentrations of pigs fed the ASP-250-supplemented diet for ad libitum intake were greater than the serum IGF-I concentrations of the pigs limit-fed the ASP-250-supplemented diet, the differences were not significant (P<.08). The ASP-250-fed pigs had higher serum IGF binding protein (BP)-3 concentrations than did their control littermates (P<.003). A time course of antimicrobially induced alterations in serum IGF-I concentrations revealed that the effect of increased serum IGF-I levels in ASP-250-supplemented pigs (P<.02) was observed within 4 d and was maintained throughout the 4-wk study. These findings show that feed intake is not responsible for the increase in serum IGF-I observed with ASP-250 supplementation. Additionally, the antimicrobially induced increase in serum IGF-I concentrations occurs within a few days after initiation of the treatment.